Inter- and intramolecular contacts in a membrane protein/surfactant complex observed by heteronuclear dipole-to-dipole cross-relaxation.
نویسندگان
چکیده
Heteronuclear dipole-to-dipole cross-relaxation has been applied to exploring intermolecular interactions and intramolecular spatial proximities in a large supramolecular structure comprised of a beta-barrel membrane protein, OmpX, in complex with a polymeric surfactant, amphipol A8-35. The experiments, performed in either the laboratory or the rotating frame, reveal the existence of intermolecular contacts between aromatic amino acids and specific groups of the polymer, in addition to intra-protein dipolar interactions, some of them involving carbonyl carbons. This study opens the perspective of collecting by NMR spectroscopy a new kind of through-space structural information involving aromatic and carbonyl (13)C atoms of large proteins.
منابع مشابه
Phenomena in J-coupled nuclear magnetic resonance spectroscopy in low magnetic fields
We present the theory and experimental results of phenomena associated to J-coupled nuclear magnetic resonance NMR spectroscopy at low magnetic fields 10−4 T . So far it was believed that in low field the chemical shift and with it the homonuclear J-coupling information is lost. This contribution shows that the network of all homoand heteronuclear J-coupling constants can be measured in low mag...
متن کاملAn NMR experiment for the accurate measurement of heteronuclear spin-lock relaxation rates.
Rotating-frame relaxation rates, R(1)(rho), are often measured in NMR studies of protein dynamics. We show here that large systematic errors can be introduced into measured values of heteronuclear R(1)(rho) rates using schemes which are usually employed to suppress cross-correlation between dipole-dipole and CSA relaxation mechanisms. For example, in a scalar-coupled two-spin X-H spin system th...
متن کاملHeteronuclear transverse and longitudinal relaxation in AX4 spin systems: Application to 15N relaxations in 15NH4+
The equations that describe the time-evolution of transverse and longitudinal (15)N magnetisations in tetrahedral ammonium ions, (15)NH4(+), are derived from the Bloch-Wangsness-Redfield density operator relaxation theory. It is assumed that the relaxation of the spin-states is dominated by (1) the intra-molecular (15)N-(1)H and (1)H-(1)H dipole-dipole interactions and (2) interactions of the a...
متن کاملRobust NMR approaches for the determination of homonuclear dipole-dipole coupling constants in studies of solid materials and biomolecules.
This review addresses the NMR spectroscopy study of molecular structure and dynamics by way of homonuclear dipole-dipole couplings by relying on their orientation and direct distance dependence. The study of homonuclear couplings as opposed to heteronuclear couplings poses specific challenges. On the one hand, two like spins cannot be independently manipulated easily, which means that simple sh...
متن کاملPolarization transfer by cross-correlated relaxation in solution NMR with very large molecules (NMR with biological macromoleculesycross relaxation-enhanced polarization transferyheteronuclear correlation)
In common multidimensional NMR experiments for studies of biological macromolecules in solution, magnetization transfers via spin–spin couplings [insensitive nuclei enhanced by polarization transfer (INEPT)] are key elements of the pulse schemes. For molecular weights beyond 100,000, transverse relaxation during the transfer time may become a limiting factor. This paper presents a transfer tech...
متن کاملذخیره در منابع من
با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید
برای دانلود متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید
ثبت ناماگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید
ورودعنوان ژورنال:
- Journal of magnetic resonance
دوره 197 1 شماره
صفحات -
تاریخ انتشار 2009